kmapper.GraphNerve

class kmapper.GraphNerve(min_intersection=1)[source]

Creates the 1-skeleton of the Mapper complex.

Parameters

min_intersection (int, default is 1) – Minimum intersection considered when computing the nerve. An edge will be created only when the intersection between two nodes is greater than or equal to min_intersection

__init__(min_intersection=1)[source]

Initialize self. See help(type(self)) for accurate signature.

Methods

__init__([min_intersection])

Initialize self.

compute(nodes)

Helper function to find edges of the overlapping clusters.